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1

Snake venomics and venom gland transcriptomic analysis of Brazilian coral snakes, Micrurus altirostris and M. corallinus

Carlos Corrêa-Netto, Inácio de L.M. Junqueira-de-Azevedo, Débora A. Silva, Paulo L. Ho, Moema Leitão-de-Araújo, Maria Lúcia M. Alves, Libia Sanz, Débora Foguel, Russolina Benedeta Zingali, Juan J. Cal

Journal:

Journal of Proteomics

Année:

2011

Langue:

english

Fichier:

PDF, 1.36 MB

english, 2011

2

Pressure provides new insights into protein folding, dynamics and structure

Jerson L Silva, Debora Foguel, Catherine A Royer

Journal:

Trends in Biochemical Sciences

Année:

2001

Langue:

english

Fichier:

PDF, 318 KB

english, 2001

3

High-Pressure Chemical Biology and Biotechnology

Silva, Jerson L., Oliveira, Andrea C., Vieira, Tuane C. R. G., de Oliveira, Guilherme A. P., Suarez, Marisa C., Foguel, Debora

Journal:

Chemical Reviews

Année:

2014

Langue:

english

Fichier:

PDF, 15.33 MB

english, 2014

4

The phenotypical expression of an European inherited TTR amyloidosis in Brazil

Márcia Waddington Cruz,Débora Foguel…

Journal:

Orphanet Journal of Rare Diseases

Année:

2015

Langue:

english

Fichier:

PDF, 268 KB

english, 2015

5

Hydrostatic pressure rescues native protein from aggregates

Debora Foguel, Clifford R. Robinson, Pedro Caetano de Sousa Jr, Jerson L. Silva, Anne Skaja Robinson

Journal:

Biotechnology and Bioengineering

Année:

1999

Langue:

english

Fichier:

PDF, 238 KB

english, 1999

6

Protein folding and aggregation: Two sides of the same coin in the condensation of proteins revealed by pressure studies

Jerson L. Silva, Yraima Cordeiro, Debora Foguel

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Année:

2006

Langue:

english

Fichier:

PDF, 443 KB

english, 2006

7

Heterologous expression and purification of a biologically active legume lectin from Cratylia mollis seeds (CRAMOLL 1)

Nathalia Varejão, Marcius da Silva Almeida, Nuccia N.T. De Cicco, Geórgia C. Atella, Luana C.B.B. Coelho, Ma Tereza S. Correia, Debora Foguel

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Année:

2010

Langue:

english

Fichier:

PDF, 850 KB

english, 2010

8

Identification of archaeal proteins that affect the exosome function in vitro

Juliana S Luz, Celso RR Ramos, Márcia CT Santos, Patricia P Coltri, Fernando L Palhano, Debora Foguel, Nilson IT Zanchin, Carla C Oliveira

Journal:

BMC Biochemistry

Année:

2010

Langue:

english

Fichier:

PDF, 4.18 MB

english, 2010

9

The fully-active and structurally-stable form of the mitochondrial ATP synthase ofPolytomellasp. is dimeric

Alexa Villavicencio-Queijeiro, Miriam Vázquez-Acevedo, Araceli Cano-Estrada, Mariel Zarco-Zavala, Marietta Tuena de Gómez, Julio A. Mignaco, Monica M. Freire, Helena M. Scofano, Debora Foguel, Pierre

Journal:

Journal of Bioenergetics and Biomembranes

Année:

2009

Langue:

english

Fichier:

PDF, 535 KB

english, 2009

10

Identification of a novel ligand binding motif in the transthyretin channel

Luis Mauricio T.R. Lima, Vivian de Almeida Silva, Leonardo de Castro Palmieri, Maria Clara B.R. Oliveira, Débora Foguel, Igor Polikarpov

Journal:

Bioorganic & Medicinal Chemistry

Année:

2010

Langue:

english

Fichier:

PDF, 743 KB

english, 2010

11

New insights into conformational and functional stability of human α-thrombin probed by high hydrostatic pressure

Luis Mauricio T. R. Lima, Russolina B. Zingali, Débora Foguel, Robson Q. Monteiro

Journal:

Année:

2004

Langue:

english

Fichier:

PDF, 282 KB

english, 2004

12

Subunit–subunit interactions and overall topology of the dimeric mitochondrial ATP synthase of Polytomella sp.

Araceli Cano-Estrada, Miriam Vázquez-Acevedo, Alexa Villavicencio-Queijeiro, Francisco Figueroa-Martínez, Héctor Miranda-Astudillo, Yraima Cordeiro, Julio A. Mignaco, Debora Foguel, Pierre Cardol, Mar

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Année:

2010

Langue:

english

Fichier:

PDF, 1.00 MB

english, 2010

13

3D-reconstruction and overall topology of the dimeric mitochondrial ATP synthase of the colorless alga Polytomella sp

Diego González-Halphen, Miriam Vázquez-Acevedo, Araceli Cano-Estrada, Alexa Villavicencio-Queijeiro, Yraima Cordeiro, Julio A. Mignaco, Debora Foguel, Pierre Cardol, Claire Remacle, Stephan Wilkens

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Année:

2010

Langue:

english

Fichier:

PDF, 59 KB

english, 2010

14

Intriguing nucleic-acid-binding features of mammalian prion protein

Jerson L. Silva, Luís Maurício T.R. Lima, Debora Foguel, Yraima Cordeiro

Journal:

Trends in Biochemical Sciences

Année:

2008

Langue:

english

Fichier:

PDF, 715 KB

english, 2008

15

Response to Radulescu and Brenig: Infectious nucleic acids in prion disease: halfway there

Jerson L. Silva, Luis Mauricio T.R. Lima, Debora Foguel, Yraima Cordeiro

Journal:

Trends in Biochemical Sciences

Année:

2009

Langue:

english

Fichier:

PDF, 84 KB

english, 2009

16

Pressure induces folding intermediates that are crucial for protein–DNA recognition and virus assembly

Jerson L. Silva, Andréa C. Oliveira, Andre M.O. Gomes, Luís Maurício T.R. Lima, Ronaldo Mohana-Borges, Ana B.F. Pacheco, Débora Foguel

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Année:

2002

Langue:

english

Fichier:

PDF, 606 KB

english, 2002

17

Effects of high pressure and temperature on the wild-type and F29W mutant forms of the N-domain of avian troponin C

Aimee Yu, Lance Ballard, Lawrence Smillie, Joyce Pearlstone, Debora Foguel, Jerson Silva, Ana Jonas, Jiri Jonas

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Année:

1999

Langue:

english

Fichier:

PDF, 483 KB

english, 1999

18

New Insights into the Mechanisms of Protein Misfolding and Aggregation in Amyloidogenic Diseases Derived from Pressure Studies†

Foguel, Débora, Silva, Jerson L.

Journal:

Année:

2004

Langue:

english

Fichier:

PDF, 317 KB

english, 2004

19

Cavity defects in the procapsid of bacteriophage P22 and the mechanism of capsid maturation

Pedro Caetano de Sousa Jr, Roman Tuma, Peter E. Prevelige Jr, Jerson L. Silva, Debora Foguel

Journal:

Journal of Molecular Biology

Année:

1999

Langue:

english

Fichier:

PDF, 329 KB

english, 1999

20

Sulfated galactan is a catalyst of antithrombin-mediated inactivation of α-thrombin

Fábio R. Melo, Mariana S. Pereira, Robson Q. Monteiro, Débora Foguel, Paulo A.S. Mourão

Journal:

Biochimica et Biophysica Acta (BBA) - General Subjects

Année:

2008

Langue:

english

Fichier:

PDF, 617 KB

english, 2008

21

Ca2+ and Mg2+ binding to weak sites of TnC C-domain induces exposure of a large hydrophobic surface that leads to loss of TnC from the thin filament

Carolina A.C.A. Braga, José Renato Pinto, Ana Paula Valente, Jerson L. Silva, Martha M. Sorenson, Débora Foguel, Marisa C. Suarez

Journal:

The International Journal of Biochemistry & Cell Biology

Année:

2006

Langue:

english

Fichier:

PDF, 275 KB

english, 2006

22

Tetramerization of the LexA Repressor in Solution: Implications for Gene Regulation of the E. coli SOS System at Acidic pH

Francisco J.R. Sousa, Luis M.T.R. Lima, Ana B.F. Pacheco, Cristiano L.P. Oliveira, Iris Torriani, Darcy F. Almeida, Debora Foguel, Jerson L. Silva, Ronaldo Mohana-Borges

Journal:

Journal of Molecular Biology

Année:

2006

Langue:

english

Fichier:

PDF, 602 KB

english, 2006

23

The Anti-Parkinsonian Drug Selegiline Delays the Nucleation Phase of α-Synuclein Aggregation Leading to the Formation of Nontoxic Species

Carolina A. Braga, Cristian Follmer, Fernando L. Palhano, Elias Khattar, Mônica S. Freitas, Luciana Romão, Saviana Di Giovanni, Hilal A. Lashuel, Jerson L. Silva, Debora Foguel

Journal:

Journal of Molecular Biology

Année:

2011

Langue:

english

Fichier:

PDF, 2.25 MB

english, 2011

24

Conformational differences between the wild type and V30M mutant transthyretin modulate its binding to genistein: Implications to tetramer stability and ligand-binding

Daniela B.B. Trivella, Lucas Bleicher, Leonardo de Castro Palmieri, Helton José Wiggers, Carlos Alberto Montanari, Jeffery W. Kelly, Luís Maurício T.R. Lima, Débora Foguel, Igor Polikarpov

Journal:

Journal of Structural Biology

Année:

2010

Langue:

english

Fichier:

PDF, 693 KB

english, 2010

25

The binding of synthetic triiodo l-thyronine analogs to human transthyretin: Molecular basis of cooperative and non-cooperative ligand recognition

Daniela B.B. Trivella, Mirela I. Sairre, Debora Foguel, Luis Mauricio T.R. Lima, Igor Polikarpov

Journal:

Journal of Structural Biology

Année:

2011

Langue:

english

Fichier:

PDF, 1.35 MB

english, 2011

26

Hydration and Packing are Crucial to Amyloidogenesis as Revealed by Pressure Studies on Transthyretin Variants that Either Protect or Worsen Amyloid Disease

Astria D. Ferrão-Gonzales, Leonardo Palmieri, Marcelo Valory, Jerson L. Silva, Hilal Lashuel, Jeffery W. Kelly, Débora Foguel

Journal:

Journal of Molecular Biology

Année:

2003

Langue:

english

Fichier:

PDF, 544 KB

english, 2003

27

The use of hydrostatic pressure as a tool to study viruses and other macromolecular assemblages

Jerson L Silva, Debora Foguel, Andrea T Da Poian, Peter E Prevelige

Journal:

Current Opinion in Structural Biology

Année:

1996

Langue:

english

Fichier:

PDF, 1.03 MB

english, 1996

28

Dissecting the Structure, Thermodynamic Stability, and Aggregation Properties of the A25T Transthyretin (A25T-TTR) Variant Involved in Leptomeningeal Amyloidosis: Identifying Protein Partners That Co-Aggregate during A25T-TTR Fibrillogenesis in Cerebrospinal Fluid

Azevedo, Estefania P. C., Pereira, Humberto M., Garratt, Richard C., Kelly, Jeffery W., Foguel, Debora, Palhano, Fernando L.

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 695 KB

english, 2011

29

Insights into the Intramolecular Coupling between the N- and C-Domains of Troponin C Derived from High-Pressure, Fluorescence, Nuclear Magnetic Resonance, and Small-Angle X-ray Scattering Studies

de Oliveira, Guilherme A. P., Rocha, Cristiane B., Marques, Mayra de A., Cordeiro, Yraima, Sorenson, Martha M., Foguel, Débora, Silva, Jerson L., Suarez, Marisa C.

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 1.84 MB

english, 2013

30

Flavonoid interactions with human transthyretin: Combined structural and thermodynamic analysis

Daniela B.B. Trivella, Caio V. dos Reis, Luís Maurício T.R. Lima, Débora Foguel, Igor Polikarpov

Journal:

Journal of Structural Biology

Année:

2012

Langue:

english

Fichier:

PDF, 1.21 MB

english, 2012

31

Predictions Suggesting a Participation of β-Sheet Configuration in the M2 Domain of the P2X7 Receptor: A Novel Conformation?

Teixeira, Pedro Celso Nogueira, de Souza, Cristina Alves Magalhães, de Freitas, Mônica Santos, Foguel, Débora, Caffarena, Ernesto Raul, Alves, Luiz Anastacio

Journal:

Biophysical Journal

Année:

2009

Langue:

english

Fichier:

PDF, 1.25 MB

english, 2009

32

Unraveling the Possible Mechanism Behind Leptomeningeal Amyloidosis Using as Model a Highly Unstable Transthyretin Tetramer

Palhano, Fernando, Azevedo, Estefania, Freire, Juliana, Palmieri, Leonardo, Lima, Luiz Mauricio, Foguel, Debora

Journal:

Biophysical Journal

Année:

2010

Langue:

english

Fichier:

PDF, 61 KB

english, 2010

33

Immunome and venome of Bothrops jararacussu: A proteomic approach to study the molecular immunology of snake toxins

Carlos Correa-Netto, Ricardo Teixeira-Araujo, Aniesse Silva Aguiar, Aníbal Rafael Melgarejo, Salvatore Giovanni De-Simone, Márcia Regina Soares, Debora Foguel, Russolina Benedeta Zingali

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 2.75 MB

english, 2010

34

International Symposium on Protein Condensation, in Honor of Gregorio Weber, May 21–25, 1997, Rio de Janeiro, Brazil

Ferreira, Sérgio T., Silva, Jerson L., Foguel, Debora, Coelho-Sampaio, Tatiana

Journal:

Biophysical Journal

Année:

1998

Langue:

english

Fichier:

PDF, 74 KB

english, 1998

35

The Amino-Terminal PrP Domain Is Crucial to Modulate Prion Misfolding and Aggregation

Cordeiro, Yraima, Kraineva, Julia, Gomes, Mariana P.B., Lopes, Marilene H., Martins, Vilma R., Lima, Luís M.T.R., Foguel, Débora, Winter, Roland, Silva, Jerson L.

Journal:

Biophysical Journal

Année:

2005

Langue:

english

Fichier:

PDF, 348 KB

english, 2005

36

Fourier Transform Infrared Spectroscopy Provides a Fingerprint for the Tetramer and for the Aggregates of Transthyretin

Cordeiro, Yraima, Kraineva, Julia, Suarez, Marisa Carvalho, Tempesta, Anna Gabriella, Kelly, Jeffery W., Silva, Jerson L., Winter, Roland, Foguel, Debora

Journal:

Biophysical Journal

Année:

2006

Langue:

english

Fichier:

PDF, 386 KB

english, 2006

37

Free-Energy Linkage between Folding and Calcium Binding in EF-Hand Proteins

Suarez, Marisa C., Rocha, Cristiane B., Sorenson, Martha M., Silva, Jerson L., Foguel, Debora

Journal:

Biophysical Journal

Année:

2008

Langue:

english

Fichier:

PDF, 166 KB

english, 2008

38

Subunit Dissociation, Unfolding, and Inactivation of Bothrojaracin, a C-Type Lectin-like Protein from Snake Venom †

Monteiro, Robson Q., Foguel, Débora, Castro, Helena C., Zingali, Russolina B.

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 103 KB

english, 2003

39

Characterization of the Unfolding Process of the Tetrameric and Dimeric Forms of Cratylia mollis Seed Lectin (CRAMOLL 1): Effects of Natural Fragmentation on Protein Stability

Varejão, Nathalia, Correia, Maria Tereza S., Foguel, Debora

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 3.56 MB

english, 2011

40

Pressure–temperature folding landscape in proteins involved in neurodegenerative diseases and cancer

Cordeiro, Yraima, Foguel, Debora, Silva, Jerson L.

Journal:

Biophysical Chemistry

Année:

2013

Langue:

english

Fichier:

PDF, 1.16 MB

english, 2013

41

Hydration, cavities and volume in protein folding, aggregation and amyloid assembly

Silva, Jerson L, Foguel, Debora

Journal:

Physical Biology

Année:

2009

Langue:

english

Fichier:

PDF, 759 KB

english, 2009

42

How Stable is an Enzyme from a Thermophilic Organism? Denaturation Studies with the Esterase from Pyrococcus Furiosus - The Role of Charge-Charge Interactions

Paz, Nathalia V., Alquéres, Sylvia M.C., Almeida, Marcius S., Almeida, Rodrigo V., Martins, Orlando B., Foguel, Debora

Journal:

Biophysical Journal

Année:

2010

Langue:

english

Fichier:

PDF, 67 KB

english, 2010

43

Mimicry of the Calcium-Induced Conformational State of Troponin C by Low Temperature under Pressure

Debora Foguel, Marisa C. Suarez, Cristiane Barbosa, Jorge J. Rodrigues, Martha M. Sorenson, Lawrence B. Smillie and Jerson L. Silva

Journal:

Proceedings of the National Academy of Sciences

Année:

1996

Langue:

english

Fichier:

PDF, 1.08 MB

english, 1996

44

Conformational Changes in Human Hsp70 Induced by High Hydrostatic Pressure Produce Oligomers with ATPase Activity but without Chaperone Activity

Araujo, Thaı́s L. S., Borges, Julio Cesar, Ramos, Carlos H., Meyer-Fernandes, José Roberto, Oliveira Júnior, Reinaldo S., Pascutti, Pedro G., Foguel, Debora, Palhano, Fernando L.

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 1.41 MB

english, 2014

45

An Intermediate Structure in the Thermal Unfolding of the GTPase Domain of Human Septin 4 (SEPT4/Bradeion-β) Forms Amyloid-like Filaments in Vitro †

Garcia, Wanius, de Araújo, Ana Paula Ulian, Lara, Flávio, Foguel, Debora, Tanaka, Manami, Tanaka, Tomoo, Garratt, Richard Charles

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 477 KB

english, 2007

46

Volume and Free Energy of Folding for Troponin C C-Domain: Linkage to Ion Binding and N-Domain Interaction †‡

Rocha, Cristiane Barbosa, Suarez, Marisa C., Yu, Aimee, Ballard, Lance, Sorenson, Martha M., Foguel, Débora, Silva, Jerson L.

Journal:

Année:

2008

Langue:

english

Fichier:

PDF, 580 KB

english, 2008

47

Role of Entropic Interactions in Viral Capsids: Single Amino Acid Substitutions in P22 Bacteriophage Coat Protein Resulting in Loss of Capsid Stability

Foguel, Debora, Teschke, Carolyn M., Prevelige, Peter E. Jr., Silva, Jerson L.

Journal:

Année:

1995

Langue:

english

Fichier:

PDF, 734 KB

english, 1995

48

Structural Insights into the Interaction between Prion Protein and Nucleic Acid †

Lima, Luis Maurício T. R., Cordeiro, Yraima, Tinoco, Luzineide W., Marques, Adriana F., Oliveira, Cristiano L. P., Sampath, Srisailam, Kodali, Ravindra, Choi, Gildon, Foguel, Débora, Torriani, Iris, C

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 629 KB

english, 2006

49

Role of Hydration in the Closed-to-Open Transition Involved in Ca 2+ Binding by Troponin C †

Suarez, Marisa C., Machado, Cosme José V., Lima, Luís Maurício T. R., Smillie, Lawrence B., Pearlstone, Joyce R., Silva, Jerson L., Sorenson, Martha M., Foguel, Débora

Journal:

Année:

2003

Langue:

english

Fichier:

PDF, 171 KB

english, 2003

50

Ligand Binding and Hydration in Protein Misfolding: Insights from Studies of Prion and p53 Tumor Suppressor Proteins †

Silva, Jerson L., Vieira, Tuane C. R. G., Gomes, Mariana P. B., Bom, Ana Paula Ano, Lima, Luis Mauricio T. R., Freitas, Monica S., Ishimaru, Daniella, Cordeiro, Yraima, Foguel, Debora

Journal:

Accounts of Chemical Research

Année:

2010

Langue:

english

Fichier:

PDF, 2.17 MB

english, 2010